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    LOC4338603 eukaryotic peptide chain release factor subunit 1-2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338603, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4338603
    Gene description
    eukaryotic peptide chain release factor subunit 1-2
    Locus tag
    OSNPB_050373900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4338603 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (18117186..18120987)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (18016651..18020418)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4338601 Neighboring gene nascent polypeptide-associated complex subunit alpha-like protein 1 Neighboring gene uncharacterized LOC4338604 Neighboring gene cytokinin dehydrogenase 9 Neighboring gene uncharacterized LOC4338607

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sequence-specific mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation release factor activity, codon specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translational termination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of translation release factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic peptide chain release factor subunit 1-2
    Names
    Os05g0373900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      18117186..18120987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066310504.1 → XP_066166601.1  eukaryotic peptide chain release factor subunit 1-2

      UniProtKB/TrEMBL
      A0A0N7KKN5, Q6I5P4, Q75K79

    2. XM_066310505.1 → XP_066166602.1  eukaryotic peptide chain release factor subunit 1-2

      UniProtKB/TrEMBL
      A0A0N7KKN5, Q6I5P4, Q75K79
    Nucleotide Protein
    Heading Accession and Version

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