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    LOC4350326 receptor protein kinase-like protein ZAR1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4350326, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4350326
    Gene description
    receptor protein kinase-like protein ZAR1
    Locus tag
    OSNPB_110300600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4350326 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (11692296..11703723)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (11211828..11224070)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354157 Neighboring gene flavin mononucleotide hydrolase 1, chloroplatic Neighboring gene uncharacterized LOC107279251 Neighboring gene uncharacterized LOC136354015 Neighboring gene E3 ubiquitin-protein ligase RSL1-like Neighboring gene uncharacterized LOC107279302

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor protein kinase-like protein ZAR1
    Names
    Os11g0300600
    Os11g0300700
    probable inactive leucine-rich repeat receptor-like protein kinase At1g66830

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      11692296..11703723
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015759878.3 → XP_015615364.1  receptor protein kinase-like protein ZAR1

      Conserved Domains (6) summary
      smart00221
      Location:433 → 757
      STYKc; Protein kinase; unclassified specificity
      cd00116
      Location:24 → 259
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:97 → 120
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:23 → 63
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam13855
      Location:97 → 155
      LRR_8; Leucine rich repeat
      cl21453
      Location:434 → 760
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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