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    LOC4351870 3-oxoacyl-[acyl-carrier-protein] reductase 4 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4351870, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4351870
    Gene description
    3-oxoacyl-[acyl-carrier-protein] reductase 4
    Locus tag
    OSNPB_120242700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4351870 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (7955494..7958760)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (7915545..7919088)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene protein VASCULATURE COMPLEXITY AND CONNECTIVITY Neighboring gene uncharacterized LOC9268826 Neighboring gene TLC domain-containing protein At5g14285 Neighboring gene uncharacterized LOC4351872

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    3-oxoacyl-[acyl-carrier-protein] reductase 4
    Names
    Os12g0242700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      7955494..7958760
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015763463.3 → XP_015618949.1  3-oxoacyl-[acyl-carrier-protein] reductase 4

      UniProtKB/TrEMBL
      B8BP22, B9GCK1, Q2QV59
      Conserved Domains (1) summary
      TIGR01830
      Location:64 → 303
      3oxo_ACP_reduc; 3-oxoacyl-(acyl-carrier-protein) reductase
    Nucleotide Protein
    Heading Accession and Version

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