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    LOC4347659 rhodanese-like domain-containing protein 14, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347659, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4347659
    Gene description
    rhodanese-like domain-containing protein 14, chloroplastic
    Locus tag
    OSNPB_090530000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1531_B07.22
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    Genomic context

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    See LOC4347659 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (25193683..25196528)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (20751734..20754572)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting-associated protein 22 homolog 1 Neighboring gene uncharacterized LOC4347658 Neighboring gene endoglucanase 23-like Neighboring gene uncharacterized LOC107282087 Neighboring gene cytochrome P450 71A1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhodanese-like domain-containing protein 14, chloroplastic
    Names
    Os09g0530000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      25193683..25196528
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756559.2 → XP_015612045.1  rhodanese-like domain-containing protein 14, chloroplastic

      UniProtKB/TrEMBL
      A0A0P0XQH1, B8BDT3, Q0J055, Q69NF7
      Conserved Domains (1) summary
      smart00450
      Location:93 → 223
      RHOD; Rhodanese Homology Domain
    Nucleotide Protein
    Heading Accession and Version

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