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    LOC4330141 RING-H2 finger protein ATL74 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330141, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4330141
    Gene description
    RING-H2 finger protein ATL74
    Locus tag
    OSNPB_020645000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1282_H11.36
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    Genomic context

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    See LOC4330141 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (26454121..26455082, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (25967739..25968877, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene palmitoyl-acyl carrier protein thioesterase, chloroplastic-like Neighboring gene magnesium/proton exchanger 2-like Neighboring gene kinesin-like protein KIN-7C Neighboring gene GATA transcription factor 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    RING-H2 finger protein ATL74
    Names
    Os02g0645000
    P0030D07.14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      26454121..26455082 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015769564.3 → XP_015625050.1  RING-H2 finger protein ATL74

      UniProtKB/TrEMBL
      A0A0P0VM90, A2X7S6, Q6H639
      Conserved Domains (1) summary
      cl17238
      Location:144 → 189
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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