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    LOC4348914 probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348914, updated on 17-Jul-2024

    Summary

    Gene symbol
    LOC4348914
    Gene description
    probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10
    Locus tag
    OSNPB_100479500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    LOGL10; OsJ_31908
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    Genomic context

    See LOC4348914 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (18668225..18673168)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (18000695..18005752)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9268696 Neighboring gene putative pentatricopeptide repeat-containing protein At1g13630 Neighboring gene mitochondrial import inner membrane translocase subunit PAM16 like 2 Neighboring gene UDP-xylose transporter 1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, hydrolyzing N-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cytokinin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10
    Names
    LOC_Os10g33900
    OSJNBa0055P24.10
    Protein LONELY GUY-like 10
    NP_001409991.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423062.1NP_001409991.1  probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10

      Status: VALIDATED

      Source sequence(s)
      AK108805, CI181618, CI410658, CI662668
      UniProtKB/Swiss-Prot
      A0A0P0XVY6, B9G6A0, Q7XDB8, Q9FWG6

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      18668225..18673168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)