HKT2;1 cation transporter HKT1-like [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: HKT2;1
Gene description: cation transporter HKT1-like
Locus tag: OSNPB_060701700
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: HKT1; OsHKT1; OsHKT2;1; Ni-OsHKT1; Po-OsHKT1; P0596H10.9
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: chromosome: 6

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	6	NC_089040.1 (30405667..30407932, complement)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	6	NC_029261.1 (29538938..29541213, complement)

Chromosome 6 - NC_089040.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

roots of OsHKT1;4 overexpressed plants suffered heavier damages from Na which excessively accumulated in the root due to increased activity of Na uptake and Na exclusion in the vasculature.
Title: T-DNA Tagging-Based Gain-of-Function of OsHKT1;4 Reinforces Na Exclusion from Leaves and Stems but Triggers Na Toxicity in Roots of Rice Under Salt Stress.
OsHKT1;1 has a role in controlling sodium concentration and preventing sodium toxicity in leaf blades and is regulated by the OsMYBc transcription factor.
Title: The Rice High-Affinity Potassium Transporter1;1 Is Involved in Salt Tolerance and Regulated by an MYB-Type Transcription Factor.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables monoatomic cation transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in monoatomic cation transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cation transporter HKT2-1

Names: HKT-type transporter; LOC_Os06g48810; cation transporter HKT1; cation transporter HKT2;1; putative sodium transporter; sodium ion transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.