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    LOC4332722 zinc finger CCCH domain-containing protein 22-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332722, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4332722
    Gene description
    zinc finger CCCH domain-containing protein 22-like
    Locus tag
    OSNPB_030328900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsC3H22
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    Genomic context

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    See LOC4332722 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (12101820..12106221)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (12046660..12051117)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein p24delta9 Neighboring gene probable apyrase 1 Neighboring gene protein BIIDXI-like Neighboring gene zinc finger CCCH domain-containing protein 23-like Neighboring gene endoglucanase 9-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger CCCH domain-containing protein 22
    Names
    LOC_Os03g21140

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417645.1 → NP_001404574.1  zinc finger CCCH domain-containing protein 22 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AK288601, CI176010
      UniProtKB/Swiss-Prot
      A0A0P0VX38, Q10M00, Q10M01
      UniProtKB/TrEMBL
      B9F892

    2. NM_001417646.1 → NP_001404575.1  zinc finger CCCH domain-containing protein 22 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK288601, CI176010, CI271692, CI383324
      UniProtKB/TrEMBL
      B7ETE2, B9F892

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      12101820..12106221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066308142.1 → XP_066164239.1  zinc finger CCCH domain-containing protein 22 isoform X1

      UniProtKB/TrEMBL
      B9F892

    2. XM_066308143.1 → XP_066164240.1  zinc finger CCCH domain-containing protein 22 isoform X2

      UniProtKB/TrEMBL
      B9F892
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q10M00.2 GenPept UniProtKB/Swiss-Prot:Q10M00

    Gene LinkOut

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