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    LOC4330916 subtilisin-like protease SBT1.4 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330916, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4330916
    Gene description
    subtilisin-like protease SBT1.4
    Locus tag
    OSNPB_020779200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1293_A01.13
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    Genomic context

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    See LOC4330916 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (32985190..32987863, complement)

    Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease SBT1.4 Neighboring gene subtilisin-like protease SBT1.4 Neighboring gene uncharacterized LOC4330917 Neighboring gene uncharacterized LOC107278402

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    subtilisin-like protease SBT1.4
    Names
    Os02g0779200
    putative subtilisin-like proteinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

      Range
      32985190..32987863 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770661.2 → XP_015626147.1  subtilisin-like protease SBT1.4

      UniProtKB/TrEMBL
      A0A0P0VQ78, A0A0P0VQ83, Q0DX23, Q6K7G5
      Conserved Domains (5) summary
      cd04852
      Location:112 → 588
      Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3
      COG1404
      Location:489 → 659
      AprE; Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones]
      cd02120
      Location:359 → 482
      PA_subtilisin_like; Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, ...
      pfam05922
      Location:68 → 114
      Inhibitor_I9; Peptidase inhibitor I9
      pfam17766
      Location:670 → 771
      fn3_6; Fibronectin type-III domain
    Nucleotide Protein
    Heading Accession and Version

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