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    LOC4342289 uncharacterized LOC4342289 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342289, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342289
    Gene description
    uncharacterized LOC4342289
    Locus tag
    OSNPB_070122100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4342289 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (1163362..1165676)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (1152478..1155203)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4342287 Neighboring gene uncharacterized LOC107281558 Neighboring gene uncharacterized LOC4342288 Neighboring gene uncharacterized LOC4342290 Neighboring gene uncharacterized LOC4342291

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4342289
    Names
    OSJNBa0057M23.119
    Os07g0122100
    P0022B05.147

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      1163362..1165676
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026026765.2 → XP_025882550.1  uncharacterized protein LOC4342289 isoform X2

      UniProtKB/TrEMBL
      A0A0P0X219, Q0D8W9
      Conserved Domains (1) summary
      pfam08224
      Location:102 → 309
      DUF1719; Domain of unknown function (DUF1719)

    2. XM_015790029.3 → XP_015645515.1  uncharacterized protein LOC4342289 isoform X1

      UniProtKB/TrEMBL
      A0A0P0X219, Q0D8W9, Q7XIE3
      Conserved Domains (1) summary
      pfam08224
      Location:102 → 333
      DUF1719; Domain of unknown function (DUF1719)
    Nucleotide Protein
    Heading Accession and Version

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