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    LOC4327572 transcription repressor OFP2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327572, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4327572
    Gene description
    transcription repressor OFP2
    Locus tag
    OSNPB_010823500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4327572 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (35792684..35794254, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (35167589..35169431, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S26-like Neighboring gene uncharacterized LOC4327571 Neighboring gene protein GRAVITROPIC IN THE LIGHT 1 Neighboring gene uncharacterized LOC4327573 Neighboring gene probable E3 ubiquitin-protein ligase ATL44

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription repressor OFP2
    Names
    Os01g0823500
    P0031D02.16
    ovate family protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      35792684..35794254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015779452.3 → XP_015634938.3  transcription repressor OFP2

      UniProtKB/TrEMBL
      A0A0P0V9W7, A0A5S6R953, Q0JI54, Q5JN79
    Nucleotide Protein
    Heading Accession and Version

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