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    LOC4348136 F-box protein At5g07610 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348136, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4348136
    Gene description
    F-box protein At5g07610
    Locus tag
    OSNPB_100155300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4348136 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (3494879..3499093)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (3467982..3471271)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase PUB23-like Neighboring gene uncharacterized LOC4348135 Neighboring gene probable amidase At4g34880 Neighboring gene uncharacterized LOC4348138 Neighboring gene leucine-rich repeat receptor-like protein kinase PEPR1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box protein At5g07610
    Names
    F-box domain-containing protein
    Os10g0155300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      3494879..3499093
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066304684.1 → XP_066160781.1  F-box protein At5g07610

      UniProtKB/TrEMBL
      A0A0P0XSD6, A0A5S6RC22, Q7G6D7, Q8SB73

    2. XM_066304683.1 → XP_066160780.1  F-box protein At5g07610

      UniProtKB/TrEMBL
      A0A0P0XSD6, A0A5S6RC22, Q7G6D7, Q8SB73
    Nucleotide Protein
    Heading Accession and Version

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