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    LOC4327069 protein RALF-like 33 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327069, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4327069
    Gene description
    protein RALF-like 33
    Locus tag
    OSNPB_010201400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0489A05.1
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (5550175..5551094, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (5540627..5541581, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene VQ motif-containing protein 4 Neighboring gene uncharacterized LOC136351384 Neighboring gene early nodulin-like protein 18 Neighboring gene protodermal factor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in calcium-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasmodesma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein RALF-like 33
    Names
    B1015E06.29
    Os01g0201400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      5550175..5551094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790286.3 → XP_015645772.1  protein RALF-like 33

      UniProtKB/TrEMBL
      A2WLS6, A2ZQD0, Q7F6F9, Q9AWJ6
      Conserved Domains (1) summary
      pfam05498
      Location:86 → 143
      RALF; Rapid ALkalinization Factor (RALF)
    Nucleotide Protein
    Heading Accession and Version

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