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    LOC4337975 acyl transferase 7-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4337975, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4337975
    Gene description
    acyl transferase 7-like
    Locus tag
    OSNPB_050179300
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    AT7; OsAT7
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    Genomic context

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    See LOC4337975 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (4754095..4756081, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (4735048..4737055, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA splicing factor SR-like 1 Neighboring gene E3 ubiquitin-protein ligase At1g63170 Neighboring gene uncharacterized LOC107280908 Neighboring gene uncharacterized LOC107276765

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    acyl transferase 7
    Names
    Acyl transferase 7
    LOC_Os05g08640
    NP_001407147.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001420218.1 → NP_001407147.1  acyl transferase 7

      Status: VALIDATED

      Source sequence(s)
      AK100028
      UniProtKB/Swiss-Prot
      Q0DKA5

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      4754095..4756081 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0DKA5.1 GenPept UniProtKB/Swiss-Prot:Q0DKA5

    Gene LinkOut

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