LOC4345795 nitrate reductase [NADH] 1-like [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: LOC4345795
Gene description: nitrate reductase [NADH] 1-like
Locus tag: OSNPB_080468100
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: NR1; NIA1; OsJ_27622
Expression: Broad expression in roots after flowering (RPKM 12.9), leaves after flowering (RPKM 7.9) and 6 other tissues See more
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Genomic context

Location:: chromosome: 8

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	8	NC_089042.1 (23172769..23178134)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	8	NC_029263.1 (23033215..23038595)

Chromosome 8 - NC_089042.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables heme binding	IEA Inferred from Electronic Annotation more info	PubMed
enables molybdenum ion binding	IEA Inferred from Electronic Annotation more info	PubMed
enables molybdopterin cofactor binding	IEA Inferred from Electronic Annotation more info	PubMed
enables nitrate reductase (NADPH) activity	IEA Inferred from Electronic Annotation more info	PubMed
enables sulfite oxidase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in nitrate assimilation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in nitric oxide biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in sulfur compound metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: nitrate reductase [NADH] 1

Names: LOC_Os08g36480; P0470B03.25; nitrate reductase apoenzyme

NP_001409523.1

EC 1.7.1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.