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    LOC4326333 putative receptor protein kinase ZmPK1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326333, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4326333
    Gene description
    putative receptor protein kinase ZmPK1
    Locus tag
    OSNPB_010670100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (28061186..28064070, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (27474044..27476911, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene putative receptor protein kinase ZmPK1 Neighboring gene uncharacterized LOC112936162 Neighboring gene putative receptor protein kinase ZmPK1 Neighboring gene uncharacterized LOC112936164

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in recognition of pollen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative receptor protein kinase ZmPK1
    Names
    Os01g0670100
    P0047F09.19
    receptor protein kinase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      28061186..28064070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015787333.3 → XP_015642819.1  putative receptor protein kinase ZmPK1

      UniProtKB/TrEMBL
      A0A0P0V6B5, A2WTM1, A2ZWD9, Q0JKJ3
      Conserved Domains (4) summary
      cd01098
      Location:330 → 414
      PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
      pfam00954
      Location:252 → 311
      S_locus_glycop; S-locus glycoprotein domain
      pfam01453
      Location:83 → 173
      B_lectin; D-mannose binding lectin
      cl21453
      Location:524 → 801
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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