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    LOC4333851 serine/threonine-protein kinase MPS1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4333851, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4333851
    Gene description
    serine/threonine-protein kinase MPS1
    Locus tag
    OSNPB_030704400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4333851 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (29187097..29193722)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (28314253..28319982)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene probable plastid-lipid-associated protein 4, chloroplastic Neighboring gene histone-lysine N-methyltransferase ASHR1 Neighboring gene oxysterol-binding protein-related protein 1C Neighboring gene ARF guanine-nucleotide exchange factor GNL2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine/tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic spindle assembly checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle assembly checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase MPS1
    Names
    Os03g0704400
    dual specificity tyrosine-phosphorylation-regulated kinase mbk-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      29187097..29193722
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066309100.1 → XP_066165197.1  serine/threonine-protein kinase MPS1 isoform X5

    2. XM_066309101.1 → XP_066165198.1  serine/threonine-protein kinase MPS1 isoform X6

    3. XM_066309099.1 → XP_066165196.1  serine/threonine-protein kinase MPS1 isoform X4

    4. XM_015776821.3 → XP_015632307.1  serine/threonine-protein kinase MPS1 isoform X1

      UniProtKB/TrEMBL
      A2XL55
      Conserved Domains (2) summary
      smart00220
      Location:427 → 717
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14131
      Location:425 → 717
      PKc_Mps1; Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK)

    5. XM_026024067.2 → XP_025879852.1  serine/threonine-protein kinase MPS1 isoform X2

      UniProtKB/TrEMBL
      A2XL55, A3ALV8, Q8LN55
      Conserved Domains (1) summary
      cd14131
      Location:400 → 692
      PKc_Mps1; Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK)

    6. XM_015776822.3 → XP_015632308.1  serine/threonine-protein kinase MPS1 isoform X3

      UniProtKB/TrEMBL
      A0A0N7KHW7, A2XL55, Q75IA9
      Conserved Domains (1) summary
      cd14131
      Location:399 → 691
      PKc_Mps1; Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK)
    Nucleotide Protein
    Heading Accession and Version

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