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    LOC4340632 anthranilate O-methyltransferase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340632, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4340632
    Gene description
    anthranilate O-methyltransferase 2
    Locus tag
    OSNPB_060244000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Biased expression in roots before flowering (RPKM 22.3), flowers (RPKM 5.2) and 2 other tissues See more
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    Genomic context

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    See LOC4340632 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (7649066..7650985, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (7480191..7482204, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene anthranilate O-methyltransferase 3 Neighboring gene anthranilate O-methyltransferase 3-like Neighboring gene small nucleolar RNA Z247 Neighboring gene uncharacterized LOC112939381 Neighboring gene uncharacterized LOC4340633 Neighboring gene uncharacterized LOC9270963

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anthranilate O-methyltransferase 2
    Names
    Os06g0244000
    P0412C04.11
    putative benzothiadiazole-induced S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      7649066..7650985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785446.3 → XP_015640932.1  anthranilate O-methyltransferase 2

      UniProtKB/TrEMBL
      B7ENA2, B8B4G9, B9FSH0, Q654H0
      Conserved Domains (1) summary
      pfam03492
      Location:38 → 370
      Methyltransf_7; SAM dependent carboxyl methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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