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    LOC4324371 E3 ubiquitin-protein ligase EL5-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324371, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4324371
    Gene description
    E3 ubiquitin-protein ligase EL5-like
    Locus tag
    OSNPB_010266100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4324371 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (9087971..9089111)

    Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene translin-associated protein X Neighboring gene la-related protein 1A Neighboring gene uncharacterized LOC4324372 Neighboring gene uncharacterized LOC4324374

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase EL5-like
    Names
    Os01g0266100
    P0499C11.25

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

      Range
      9087971..9089111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015786966.2 → XP_015642452.1  E3 ubiquitin-protein ligase EL5-like

      UniProtKB/TrEMBL
      A0A0N7KCQ4, A0A9K3Y7S8, A2WN74, Q0JNT9, Q9LJ01
      Conserved Domains (1) summary
      cl17238
      Location:102 → 145
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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