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    LOC4324444 uncharacterized LOC4324444 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324444, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4324444
    Gene description
    uncharacterized LOC4324444
    Locus tag
    OSNPB_010588800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0415C01.2
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    Genomic context

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    See LOC4324444 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (23522018..23525928)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (22948150..22952214)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4324443 Neighboring gene uncharacterized LOC107278014 Neighboring gene cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG-like Neighboring gene uncharacterized LOC136354964

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-arginine omega-N symmetric methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial respiratory chain complex I assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4324444
    Names
    ATP synthase beta subunit/transcription termination factor rho-like
    NADH dehydrogenase [ubiquinone] complex I, assembly factor 7
    Os01g0588800
    protein arginine methyltransferase NDUFAF7, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      23522018..23525928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766937.3 → XP_015622423.1  uncharacterized protein LOC4324444

      UniProtKB/TrEMBL
      A0A0P0V4L9, B8AB72, B9EXT0, Q5ZC77
      Conserved Domains (2) summary
      COG1565
      Location:122 → 504
      MidA; SAM-dependent methyltransferase, MidA family [General function prediction only]
      pfam02636
      Location:169 → 425
      Methyltransf_28; Putative S-adenosyl-L-methionine-dependent methyltransferase

    2. XM_015766938.3 → XP_015622424.1  uncharacterized protein LOC4324444

      UniProtKB/TrEMBL
      A0A0P0V4L9, B8AB72, B9EXT0, Q5ZC77
      Conserved Domains (2) summary
      COG1565
      Location:122 → 504
      MidA; SAM-dependent methyltransferase, MidA family [General function prediction only]
      pfam02636
      Location:169 → 425
      Methyltransf_28; Putative S-adenosyl-L-methionine-dependent methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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