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    LOC4342829 uncharacterized LOC4342829 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342829, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342829
    Gene description
    uncharacterized LOC4342829
    Locus tag
    OSNPB_070247000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0639B07.7
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    Genomic context

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    See LOC4342829 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (8271203..8272747)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (8191041..8192578)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4342828 Neighboring gene uncharacterized LOC107276709 Neighboring gene O-methyltransferase 1, chloroplastic-like Neighboring gene transfer RNA glutamic acid (anticodon CUC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4342829
    Names
    OSJNBa0003K21.33
    Os07g0247000
    mucin-1
    mucin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      8271203..8272747
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790781.3 → XP_015646267.1  uncharacterized protein LOC4342829

      UniProtKB/TrEMBL
      Q0D7H3, Q6YSY6
      Conserved Domains (1) summary
      cd15801
      Location:29 → 175
      PMEI-like_1; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitors
    Nucleotide Protein
    Heading Accession and Version

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