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    LOC9267013 uncharacterized LOC9267013 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9267013, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9267013
    Gene description
    uncharacterized LOC9267013
    Locus tag
    OSNPB_030803200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsCLE306
    Expression
    Broad expression in flowers (RPKM 2.2), flower buds (RPKM 1.7) and 5 other tissues See more
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (34489590..34491479, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (33517154..33519070, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene vesicle-associated membrane protein 721 Neighboring gene glycine-rich protein 5 Neighboring gene uncharacterized LOC136355623 Neighboring gene probable prolyl 4-hydroxylase 4 Neighboring gene probable prolyl 4-hydroxylase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Gain-of-function phenotypes of chemically synthetic CLAVATA3/ESR-related (CLE) peptides in Arabidopsis thaliana and Oryza sativa. Kinoshita A, et al. Plant Cell Physiol, 2007 Dec. PMID 17991631
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC9267013
    Names
    CLE family OsCLE306 protein
    Os03g0803200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      34489590..34491479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773329.3 → XP_015628815.1  uncharacterized protein LOC9267013

      UniProtKB/TrEMBL
      A0A0P0W4F8
    Nucleotide Protein
    Heading Accession and Version

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