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    LOC4348318 uncharacterized LOC4348318 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348318, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4348318
    Gene description
    uncharacterized LOC4348318
    Locus tag
    OSNPB_100324600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4348318 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (9446316..9451049)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (8980233..8985000)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene profilin-A-like Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC107278971 Neighboring gene probable chromo domain-containing protein LHP1 Neighboring gene uncharacterized LOC4348323

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4348318
    Names
    Os10g0324600
    zinc finger RNA-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      9446316..9451049
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757310.3 → XP_015612796.1  uncharacterized protein LOC4348318

      UniProtKB/TrEMBL
      B8BG79, Q0IYF1, Q7XFT9
      Conserved Domains (2) summary
      smart00451
      Location:301 → 330
      ZnF_U1; U1-like zinc finger
      sd00020
      Location:196 → 218
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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