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    LOC4340512 protein EXORDIUM-like 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340512, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4340512
    Gene description
    protein EXORDIUM-like 2
    Locus tag
    OSNPB_060219900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4340512 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (6345031..6346301, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (6177852..6179330, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene F-box protein FBW2 Neighboring gene uncharacterized LOC4340511 Neighboring gene protein PHOSPHATE-INDUCED 1 homolog Neighboring gene protein EXORDIUM

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein EXORDIUM-like 2
    Names
    Os06g0219900
    P0436F11.30
    putative phi-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      6345031..6346301 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015788536.3 → XP_015644022.1  protein EXORDIUM-like 2

      UniProtKB/TrEMBL
      A0A0P0WUQ1, A2YAS1, Q67X78
      Conserved Domains (1) summary
      pfam04674
      Location:54 → 313
      Phi_1; Phosphate-induced protein 1 conserved region
    Nucleotide Protein
    Heading Accession and Version

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