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    LOC4340459 mitochondrial phosphate carrier protein 3, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340459, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4340459
    Gene description
    mitochondrial phosphate carrier protein 3, mitochondrial
    Locus tag
    OSNPB_060210500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4340459 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (5804869..5808483)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (5638040..5641654)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene L-type lectin-domain containing receptor kinase SIT2-like Neighboring gene E3 ubiquitin-protein ligase RZF1 Neighboring gene transcription factor HEC2 Neighboring gene protein ALP1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial phosphate ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial phosphate carrier protein 3, mitochondrial
    Names
    Os06g0210500
    P0021C04.12
    putative mitochondrial phosphate transporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      5804869..5808483
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785407.2 → XP_015640893.1  mitochondrial phosphate carrier protein 3, mitochondrial

      Conserved Domains (1) summary
      pfam00153
      Location:170 → 256
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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