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    LOC4335639 exocyst complex component EXO70A1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4335639, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4335639
    Gene description
    exocyst complex component EXO70A1
    Locus tag
    OSNPB_040382200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4335639 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (18740570..18743202)

    Chromosome 4 - NC_029259.1Genomic Context describing neighboring genes Neighboring gene transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Neighboring gene SWI/SNF complex component SNF12 homolog Neighboring gene uncharacterized LOC112938602 Neighboring gene SNF1-related protein kinase regulatory subunit gamma-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029259.1 Chromosome 4 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component EXO70A1
    Names
    Os04g0382200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029259.1 Reference IRGSP-1.0 Primary Assembly

      Range
      18740570..18743202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015780362.2 → XP_015635848.1  exocyst complex component EXO70A1

      UniProtKB/TrEMBL
      A0A0P0W9H6, A3AT49, Q7XVB9
      Conserved Domains (1) summary
      pfam03081
      Location:303 → 673
      Exo70; Exo70 exocyst complex subunit
    Nucleotide Protein
    Heading Accession and Version

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