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    LOC4326432 insulin-degrading enzyme-like 1, peroxisomal [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326432, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4326432
    Gene description
    insulin-degrading enzyme-like 1, peroxisomal
    Locus tag
    OSNPB_010778800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0010B10.6
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    Genomic context

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    See LOC4326432 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (33571238..33582667)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (32965287..32976823)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene protein SOSEKI 1 Neighboring gene vacuole membrane protein KMS1 Neighboring gene insulin-degrading enzyme-like 1, peroxisomal Neighboring gene L-type lectin-domain containing receptor kinase IX.1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    insulin-degrading enzyme-like 1, peroxisomal
    Names
    Os01g0778800
    putative insulin degrading enzyme
    zinc-metallopeptidase, peroxisomal

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      33571238..33582667
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757252.3 → XP_015612738.1  insulin-degrading enzyme-like 1, peroxisomal isoform X1

      UniProtKB/TrEMBL
      A0A0P0V8V7, B8AAE3, Q5ZCF2
      Conserved Domains (1) summary
      COG1025
      Location:22 → 932
      Ptr; Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]

    2. XM_066304421.1 → XP_066160518.1  insulin-degrading enzyme-like 1, peroxisomal isoform X2

    Nucleotide Protein
    Heading Accession and Version

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