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    LOC4347747 putrescine hydroxycinnamoyltransferase 3-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347747, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4347747
    Gene description
    putrescine hydroxycinnamoyltransferase 3-like
    Locus tag
    OSNPB_090543900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    PHT3; OsPHT3; P0705E11.3
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    Genomic context

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    See LOC4347747 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (25894168..25896249)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (21450569..21452663)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351726 Neighboring gene ornithine decarboxylase 1B, chloroplastic Neighboring gene putrescine hydroxycinnamoyltransferase-like Neighboring gene serine/threonine-protein kinase STY46

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionarily Distinct BAHD N-Acyltransferases Are Responsible for Natural Variation of Aromatic Amine Conjugates in Rice. Peng M, et al. Plant Cell, 2016 Jul. PMID 27354554, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putrescine hydroxycinnamoyltransferase 3
    Names
    LOC_Os09g37180
    Os09g0543900
    putative anthranilate N-benzoyltransferase
    putrescine hydroxycinnamoyl transferase
    NP_001390865.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001403936.1 → NP_001390865.1  putrescine hydroxycinnamoyltransferase 3

      Status: VALIDATED

      Source sequence(s)
      AK109723, CI142941, CI409826, CI556271, CI772850, KX430018
      UniProtKB/Swiss-Prot
      Q7XXN5
      UniProtKB/TrEMBL
      A0A1L2EH72, A2Z3N2

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      25894168..25896249
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XXN5.1 GenPept UniProtKB/Swiss-Prot:Q7XXN5

    Gene LinkOut

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