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    LOC4325960 scopoletin glucosyltransferase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325960, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4325960
    Gene description
    scopoletin glucosyltransferase
    Locus tag
    OSNPB_010597800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0025A05.8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (24030664..24032468)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (23456051..23458043)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112939609 Neighboring gene amino acid transporter AVT1I Neighboring gene amino acid transporter AVT1I Neighboring gene probable UDP-glucosyl transferase 73B6 Neighboring gene calcineurin B-like protein 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    scopoletin glucosyltransferase
    Names
    Os01g0597800
    glucosyltransferase IS5a salicylate-induced-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      24030664..24032468
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015765680.3 → XP_015621166.1  scopoletin glucosyltransferase

      UniProtKB/TrEMBL
      A0A0N7KD96, A0A9K3Y771, A2ZV23, Q0JLI3, Q5ZAF2
      Conserved Domains (2) summary
      COG1819
      Location:11 → 470
      YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]
      cl10013
      Location:5 → 492
      Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
    Nucleotide Protein
    Heading Accession and Version

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