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    LOC4329744 sugar transport protein MST1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329744, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4329744
    Gene description
    sugar transport protein MST1-like
    Locus tag
    OSNPB_020574500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0703B01.6
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    Genomic context

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    See LOC4329744 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (22519911..22523271, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (22038641..22042157, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene sugar transport protein MST1-like Neighboring gene sugar transport protein MST1-like Neighboring gene uncharacterized LOC4329745 Neighboring gene putative ETHYLENE INSENSITIVE 3-like 4 protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sugar transport protein MST1-like
    Names
    Os02g0574500
    putative monosaccharide transporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      22519911..22523271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015767277.3 → XP_015622763.1  sugar transport protein MST1-like

      UniProtKB/TrEMBL
      A0A0P0VKQ4, B7EVF7, Q69S90
      Conserved Domains (1) summary
      cl28910
      Location:221 → 391
      MFS; Major Facilitator Superfamily

    2. XM_066308056.1 → XP_066164153.1  sugar transport protein MST1-like

      UniProtKB/TrEMBL
      A0A0P0VKQ4, B7EVF7, Q69S90
    Nucleotide Protein
    Heading Accession and Version

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