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    LOC4352785 protein kinase PINOID-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4352785, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4352785
    Gene description
    protein kinase PINOID-like
    Locus tag
    OSNPB_120614600
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    PID; OsPID
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (26771251..26773032)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (26055196..26056982)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene phospholipase A1-II 7 Neighboring gene phospholipase A1-II 7 Neighboring gene uncharacterized LOC112937500 Neighboring gene wall-associated receptor kinase 2 Neighboring gene uncharacterized LOC4352787 Neighboring gene wall-associated receptor kinase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein kinase PINOID
    Names
    LOC_Os12g42020
    NP_001410555.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423626.1 → NP_001410555.1  protein kinase PINOID

      Status: VALIDATED

      Source sequence(s)
      AK106290, AP014968, CI251440
      UniProtKB/Swiss-Prot
      A0A0P0YCM1, Q2QM77

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      26771251..26773032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2QM77.1 GenPept UniProtKB/Swiss-Prot:Q2QM77

    Gene LinkOut

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