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    LOC4343229 uncharacterized LOC4343229 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343229, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC4343229
    Gene description
    uncharacterized LOC4343229
    Locus tag
    OSNPB_070479600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4343229 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (17592173..17595013, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (17426576..17429431, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase-like Neighboring gene vacuolar protein sorting-associated protein 24 homolog 1 Neighboring gene uncharacterized LOC136357381 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 32

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4343229
    Names
    Os07g0479600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      17592173..17595013 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015791982.3 → XP_015647468.1  uncharacterized protein LOC4343229 isoform X3

      UniProtKB/TrEMBL
      A0A0P0X5W1, Q0D6H2
      Conserved Domains (1) summary
      pfam13259
      Location:45 → 149
      DUF4050; Protein of unknown function (DUF4050)

    2. XM_015791979.3 → XP_015647465.1  uncharacterized protein LOC4343229 isoform X2

      Conserved Domains (1) summary
      pfam13259
      Location:67 → 171
      DUF4050; Protein of unknown function (DUF4050)

    3. XM_015791978.3 → XP_015647464.1  uncharacterized protein LOC4343229 isoform X1

      Conserved Domains (1) summary
      pfam13259
      Location:69 → 174
      DUF4050; Protein of unknown function (DUF4050)

    4. XM_015791980.3 → XP_015647466.1  uncharacterized protein LOC4343229 isoform X2

      Conserved Domains (1) summary
      pfam13259
      Location:67 → 171
      DUF4050; Protein of unknown function (DUF4050)

    5. XM_066312185.1 → XP_066168282.1  uncharacterized protein LOC4343229 isoform X3

      UniProtKB/TrEMBL
      A0A0P0X5W1, Q0D6H2
    Nucleotide Protein
    Heading Accession and Version

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