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    LOC4349785 stress-response A/B barrel domain-containing protein At5g22580 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349785, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349785
    Gene description
    stress-response A/B barrel domain-containing protein At5g22580
    Locus tag
    OSNPB_110150400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349785 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (2388884..2391116, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (2343620..2344761, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4349783 Neighboring gene uncharacterized LOC136353906 Neighboring gene putative RING-H2 finger protein ATL71 Neighboring gene uncharacterized LOC136353846 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene serine/threonine-protein kinase D6PKL1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    stress-response A/B barrel domain-containing protein At5g22580
    Names
    Os11g0150400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      2388884..2391116 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015760117.3 → XP_015615603.1  stress-response A/B barrel domain-containing protein At5g22580

      UniProtKB/TrEMBL
      A3ANI8, Q53PY3
      Conserved Domains (1) summary
      smart00886
      Location:4 → 88
      Dabb; Stress responsive A/B Barrel Domain
    Nucleotide Protein
    Heading Accession and Version

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