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    LOC4349823 transcription repressor OFP13 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349823, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349823
    Gene description
    transcription repressor OFP13
    Locus tag
    OSNPB_110156300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349823 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (2705024..2706460)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (2658976..2660444)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9266777 Neighboring gene uncharacterized LOC4349822 Neighboring gene transcription repressor OFP8-like Neighboring gene putative HVA22-like protein g

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription repressor OFP13
    Names
    Os11g0156300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      2705024..2706460
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015760488.3 → XP_015615974.1  transcription repressor OFP13

      UniProtKB/TrEMBL
      A2ZBM6, Q0IUH6, Q53ND9
      Conserved Domains (1) summary
      TIGR01568
      Location:191 → 253
      A_thal_3678; uncharacterized plant-specific domain TIGR01568
    Nucleotide Protein
    Heading Accession and Version

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