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    LOC4336076 anthranilate synthase beta subunit 1, chloroplastic-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336076, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4336076
    Gene description
    anthranilate synthase beta subunit 1, chloroplastic-like
    Locus tag
    OSNPB_040463500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    ASB1; OASB1; OsASB1
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    Genomic context

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    See LOC4336076 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (23633516..23637176, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (23139139..23142814, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene protein FLOURY 1 Neighboring gene putative pentatricopeptide repeat-containing protein At1g09680 Neighboring gene vacuolar iron transporter 1.1-like Neighboring gene uncharacterized LOC4336077 Neighboring gene uncharacterized LOC4336079

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In vitro reconstitution of rice anthranilate synthase: distinct functional properties of the alpha subunits OASA1 and OASA2. Kanno T, et al. Plant Mol Biol, 2004 Jan. PMID 15159631
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables anthranilate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tryptophan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anthranilate synthase beta subunit 1, chloroplastic
    Names
    Anthranilate synthase, glutamine amidotransferase component 2-1
    B1358B12.20
    LOC_Os04g38950
    OSJNBa0060P14.1
    anthranilate synthase beta 1 subunit
    NP_001406332.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419403.1 → NP_001406332.1  anthranilate synthase beta subunit 1, chloroplastic

      Status: VALIDATED

      Source sequence(s)
      AB116721, AK107879, AP014960, CI181845
      UniProtKB/Swiss-Prot
      A0A0P0WBC9, Q7XUS2
      UniProtKB/TrEMBL
      Q25A90

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      23633516..23637176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XUS2.1 GenPept UniProtKB/Swiss-Prot:Q7XUS2

    Gene LinkOut

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