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    LOC4349877 egg cell-secreted protein 1.2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349877, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349877
    Gene description
    egg cell-secreted protein 1.2
    Locus tag
    OSNPB_110168000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349877 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (3336378..3337147, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (3288479..3289269, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component EXO70C1 Neighboring gene abscisic stress-ripening protein 5 Neighboring gene uncharacterized LOC116435279 Neighboring gene 60S ribosomal protein L3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in double fertilization forming a zygote and endosperm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    egg cell-secreted protein 1.2
    Names
    Os11g0168000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      3336378..3337147 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015761273.3 → XP_015616759.1  egg cell-secreted protein 1.2

      UniProtKB/TrEMBL
      A0A0P0XZI4, A2ZBV3, Q53JF8
      Conserved Domains (1) summary
      pfam05617
      Location:56 → 118
      Prolamin_like; Prolamin-like
    Nucleotide Protein
    Heading Accession and Version

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