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    LOC4347801 nudix hydrolase 23, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347801, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4347801
    Gene description
    nudix hydrolase 23, chloroplastic
    Locus tag
    OSNPB_090553300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4347801 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (26366654..26370523, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (21922900..21926073, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351773 Neighboring gene NAC domain-containing protein 86 Neighboring gene histone H4 Neighboring gene UTP--glucose-1-phosphate uridylyltransferase Neighboring gene nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic-like Neighboring gene uncharacterized LOC4347803

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    nudix hydrolase 23, chloroplastic
    Names
    Os09g0553300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      26366654..26370523 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756426.3 → XP_015611912.1  nudix hydrolase 23, chloroplastic

      UniProtKB/TrEMBL
      B8BEC0, B9G4Z1
      Conserved Domains (2) summary
      pfam14803
      Location:76 → 107
      Nudix_N_2; Nudix N-terminal
      cl00447
      Location:100 → 229
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...
    Nucleotide Protein
    Heading Accession and Version

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