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    LOC4341107 protein MOTHER of FT and TFL1 homolog 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341107, updated on 20-Sep-2023

    Summary

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    Gene symbol
    LOC4341107
    Gene description
    protein MOTHER of FT and TFL1 homolog 1-like
    Locus tag
    OSNPB_060498800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    MFT1; OsMFT1
    Expression
    Broad expression in milk grains (RPKM 39.9), mature seeds (RPKM 29.9) and 5 other tissues See more
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    Genomic context

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    See LOC4341107 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (17539922..17542577, complement)

    Chromosome 6 - NC_029261.1Genomic Context describing neighboring genes Neighboring gene nucleolar complex protein 3 homolog Neighboring gene U-box domain-containing protein 20 Neighboring gene GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic Neighboring gene uncharacterized LOC4341109

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029261.1 Chromosome 6 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. OsMFT1 increases spikelets per panicle and delays heading date in rice by suppressing Ehd1, FZP and SEPALLATA-like genes. Song S, et al. J Exp Bot, 2018 Aug 14. PMID 30124949, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. OsMFT1 is a suppressor of flowering acting downstream of Ghd7 and upstream of Ehd1, and a positive regulator of panicle architecture.
      Title: OsMFT1 increases spikelets per panicle and delays heading date in rice by suppressing Ehd1, FZP and SEPALLATA-like genes.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein MOTHER of FT and TFL1 homolog 1
    Names
    LOC_Os06g30370
    P0596H06.13
    Protein MOTHER of FT and TFL1 homolog 1
    protein MOTHER of FT and TF 1
    putative terminal flower 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423993.1 → NP_001410922.1  protein MOTHER of FT and TFL1 homolog 1

      Status: VALIDATED

      Source sequence(s)
      CI154344, CI686965
      UniProtKB/Swiss-Prot
      Q656A5
      UniProtKB/TrEMBL
      A0A2H4C0A1, A2YD98

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029261.1 Reference IRGSP-1.0 Primary Assembly

      Range
      17539922..17542577 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015786248.2 → XP_015641734.1  protein MOTHER of FT and TFL1 homolog 1

      UniProtKB/Swiss-Prot
      Q656A5
      Conserved Domains (1) summary
      cl00227
      Location:1 → 175
      PEBP; PhosphatidylEthanolamine-Binding Protein (PEBP) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q656A5.1 GenPept UniProtKB/Swiss-Prot:Q656A5

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