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    LOC4327471 uncharacterized LOC4327471 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327471, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4327471
    Gene description
    uncharacterized LOC4327471
    Locus tag
    OSNPB_010847100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4327471 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (37017255..37017992)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (36391942..36392832)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene ultraviolet-B receptor UVR8 Neighboring gene transcription initiation factor TFIID subunit 12b Neighboring gene probable mannose-1-phosphate guanylyltransferase 2 Neighboring gene CASP-like protein 5B1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized LOC4327471
    Names
    Os01g0847100
    P0005H10.10-1
    P0446B05.38-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001406344.1 → NP_001393273.1  uncharacterized LOC4327471

      Status: VALIDATED

      Source sequence(s)
      BT129222, CI311741, CI606409
      UniProtKB/TrEMBL
      A0A0P0VAB2, B8AC35, Q0JHS0, Q5N788, Q5N9M3

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      37017255..37017992
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      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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