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    LOC9270043 transcription initiation factor TFIID subunit 8 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9270043, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9270043
    Gene description
    transcription initiation factor TFIID subunit 8
    Locus tag
    OSNPB_020699900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1111_E07.4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (29284189..29285366)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (28794113..28795353)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 2 Neighboring gene uncharacterized LOC136355121 Neighboring gene wall-associated receptor kinase 17-like Neighboring gene uncharacterized protein At1g51745 Neighboring gene cell division cycle 20.2, cofactor of APC complex

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription initiation factor TFIID subunit 8
    Names
    Os02g0699900
    P0459B01.33

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      29284189..29285366
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770286.3 → XP_015625772.1  transcription initiation factor TFIID subunit 8

      UniProtKB/TrEMBL
      B8AH79, Q6Z8D5, Q6ZIL6
      Conserved Domains (1) summary
      cl22885
      Location:22 → 86
      TAF9; TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
    Nucleotide Protein
    Heading Accession and Version

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