U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC4324375 uncharacterized isomerase BH0283 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324375, updated on 3-Dec-2024

    Summary

    Gene symbol
    LOC4324375
    Gene description
    uncharacterized isomerase BH0283
    Locus tag
    OSNPB_010266500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0011D01.4
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC4324375 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (9127475..9130323, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (9114577..9117501, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4324372 Neighboring gene uncharacterized LOC4324374 Neighboring gene peroxiredoxin-2F, mitochondrial-like Neighboring gene vacuolar lysine transporter YPQ1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    uncharacterized isomerase BH0283
    Names
    Os01g0266500
    P0499C11.32
    putative MAWD binding protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001428104.1NP_001415033.1  uncharacterized isomerase BH0283

      Status: VALIDATED

      Source sequence(s)
      AK101084, AP014957
      UniProtKB/TrEMBL
      B8AC77, Q7F8F3, Q9SDD7

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      9127475..9130323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015765794.3XP_015621280.1  uncharacterized isomerase BH0283 isoform X1

      Conserved Domains (2) summary
      pfam02567
      Location:11246
      PhzC-PhzF; Phenazine biosynthesis-like protein
      cl19724
      Location:10125
      DAP_epimerase; Diaminopimelate epimerase

    RNA

    1. XR_010739725.1 RNA Sequence