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    LOC9270248 E3 ubiquitin-protein ligase RHF2A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9270248, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC9270248
    Gene description
    E3 ubiquitin-protein ligase RHF2A
    Locus tag
    OSNPB_110572500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    RHF
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    Genomic context

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    See LOC9270248 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (23415263..23420223, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (21480185..21485132, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene probable disease resistance protein At5g63020 Neighboring gene sialyltransferase-like protein 5 Neighboring gene prolycopene isomerase 1, chloroplastic Neighboring gene arginine-specific demethylase JMJ22

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RHF2A
    Names
    Os11g0572500
    putative RING-H2 zinc finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423423.1 → NP_001410352.1  E3 ubiquitin-protein ligase RHF2A

      Status: VALIDATED

      Source sequence(s)
      AK104853, AY323129, CI067515, CI142015, CI755010
      UniProtKB/TrEMBL
      A0A8J8XM66, B9GBA1, Q2R2A8, Q7XJB5

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      23415263..23420223 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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