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    LOC4336889 maltose excess protein 1-like, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336889, updated on 6-Jun-2024

    Summary

    Gene symbol
    LOC4336889
    Gene description
    maltose excess protein 1-like, chloroplastic
    Locus tag
    OSNPB_040602400
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    MEX1
    Expression
    Broad expression in flowers (RPKM 61.6), flower buds (RPKM 21.5) and 4 other tissues See more
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    Genomic context

    See LOC4336889 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (30396915..30401969, complement)

    Chromosome 4 - NC_029259.1Genomic Context describing neighboring genes Neighboring gene thylakoid lumenal 29 kDa protein, chloroplastic Neighboring gene uncharacterized LOC4336887 Neighboring gene pectin acetylesterase 7 Neighboring gene pentatricopeptide repeat-containing protein At3g22150, chloroplastic

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_029259.1 Chromosome 4 Reference IRGSP-1.0 Primary Assembly

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General protein information

    Preferred Names
    maltose excess protein 1-like, chloroplastic
    Names
    LOC_Os04g51330
    OSJNBa0041A02.13
    maltose transporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419845.1NP_001406774.1  maltose excess protein 1-like, chloroplastic

      Status: VALIDATED

      Source sequence(s)
      AK071005, KC865045
      UniProtKB/Swiss-Prot
      Q7XTQ5
      UniProtKB/TrEMBL
      Q01HT0, Q0JAF1, S5MYP9

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029259.1 Reference IRGSP-1.0 Primary Assembly

      Range
      30396915..30401969 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015780569.2XP_015636055.1  maltose excess protein 1-like, chloroplastic

      UniProtKB/Swiss-Prot
      Q7XTQ5
      UniProtKB/TrEMBL
      Q0JAF1