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    LOC4342193 kinesin-like protein KIN-14N [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342193, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4342193
    Gene description
    kinesin-like protein KIN-14N
    Locus tag
    OSNPB_070105700
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    KIN14N; OsJ_22797
    Expression
    Broad expression in flower buds (RPKM 8.3), mature seeds (RPKM 4.1) and 6 other tissues See more
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    Genomic context

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    See LOC4342193 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (307037..312054, complement)

    Chromosome 7 - NC_029262.1Genomic Context describing neighboring genes Neighboring gene sulfated surface glycoprotein 185 Neighboring gene photosynthetic NDH subunit of lumenal location 3, chloroplastic Neighboring gene uncharacterized LOC112939579 Neighboring gene probable disease resistance protein At5g45440

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029262.1 Chromosome 7 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinesin-like protein KIN-14N
    Names
    B1317D11.110
    LOC_Os07g01490
    P0446F04.141
    P0617C02.115
    kinesin-5
    kinesin-related protein KLPA-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001421957.1 → NP_001408886.1  kinesin-like protein KIN-14N

      Status: VALIDATED

      Source sequence(s)
      AK063949, AP014963, CI621970
      UniProtKB/Swiss-Prot
      A0A0P0X1E2, A3BFT0, Q7XAL1
      UniProtKB/TrEMBL
      B8B6J5

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029262.1 Reference IRGSP-1.0 Primary Assembly

      Range
      307037..312054 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789253.2 → XP_015644739.1  kinesin-like protein KIN-14N

      UniProtKB/Swiss-Prot
      A3BFT0
      Conserved Domains (2) summary
      COG1196
      Location:76 → 420
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01366
      Location:416 → 749
      KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A3BFT0.2 GenPept UniProtKB/Swiss-Prot:A3BFT0

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