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    LOC4325473 leucine-rich repeat extensin-like protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325473, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC4325473
    Gene description
    leucine-rich repeat extensin-like protein 2
    Locus tag
    OSNPB_010139200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0480E02.3
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    Genomic context

    See LOC4325473 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (2092142..2094819, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (2084476..2087221, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene L-Ala-D/L-amino acid epimerase Neighboring gene reticulon-like protein B9 Neighboring gene putative lipid phosphate phosphatase 3, chloroplastic Neighboring gene uncharacterized LOC136354996

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    leucine-rich repeat extensin-like protein 2
    Names
    Os01g0139200

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      2092142..2094819 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015760918.3XP_015616404.1  leucine-rich repeat extensin-like protein 2

      UniProtKB/TrEMBL
      A0A0P0UY33, A0A5S6RDE4, A0A9K3Y8D8, A2WKG3, A2ZP24, Q0JQT8, Q5ZDH9
      Conserved Domains (1) summary
      cd06410
      Location:59163
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...