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    LOC4332590 uncharacterized LOC4332590 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332590, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4332590
    Gene description
    uncharacterized LOC4332590
    Locus tag
    OSNPB_030304500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4332590 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (10825810..10828921, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (10772396..10775860, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene BRCT domain-containing protein At4g02110 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC4332591 Neighboring gene acetate--CoA ligase CCL3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4332590
    Names
    Os03g0304500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      10825810..10828921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772912.3 → XP_015628398.1  uncharacterized protein LOC4332590

      UniProtKB/TrEMBL
      A0A8J8YHD6, A2XFS3, A3AH51, Q0DSJ7, Q10ML4
      Conserved Domains (3) summary
      cd06257
      Location:421 → 453
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      sd00006
      Location:304 → 334
      TPR; TPR repeat [structural motif]
      pfam13432
      Location:270 → 338
      TPR_16; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

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