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    LOC4330494 pentatricopeptide repeat-containing protein At1g77360, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330494, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4330494
    Gene description
    pentatricopeptide repeat-containing protein At1g77360, mitochondrial
    Locus tag
    OSNPB_020711100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1038_A06.22; OJ1311_H06.32
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    Genomic context

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    See LOC4330494 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (29955324..29957171, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (29463737..29465654, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene heat shock 70 kDa protein 17 Neighboring gene uncharacterized LOC4330493 Neighboring gene uncharacterized protein At1g26090, chloroplastic Neighboring gene 17.8 kDa heat shock protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pentatricopeptide repeat-containing protein At1g77360, mitochondrial
    Names
    Os02g0711100
    pentatricopeptide (PPR) repeat-containing protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      29955324..29957171 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015771441.3 → XP_015626927.1  pentatricopeptide repeat-containing protein At1g77360, mitochondrial

      UniProtKB/TrEMBL
      A0A0P0VNR3, A2X8U9, Q6ZFX5
      Conserved Domains (2) summary
      PLN03218
      Location:178 → 424
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:323 → 350
      PPR; PPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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