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    LOC4330691 uncharacterized LOC4330691 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330691, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4330691
    Gene description
    uncharacterized LOC4330691
    Locus tag
    OSNPB_020742000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4330691 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (31559176..31566418)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (31064020..31071241)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene nucleobase-ascorbate transporter 6 Neighboring gene uncharacterized LOC4330690 Neighboring gene uncharacterized LOC4330692 Neighboring gene rac-like GTP-binding protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4330691
    Names
    Os02g0742000
    P0516G10.37-1
    P0585G03.15-1
    putative serine-threonine rich antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      31559176..31566418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015769757.3 → XP_015625243.1  uncharacterized protein LOC4330691

      UniProtKB/TrEMBL
      Q0DXN8, Q6Z7R3
      Conserved Domains (2) summary
      smart00509
      Location:371 → 450
      TFS2N; Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)
      cd04713
      Location:71 → 212
      BAH_plant_3; BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these ...
    Nucleotide Protein
    Heading Accession and Version

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