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    LOC4336765 protein DMR6-LIKE OXYGENASE 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336765, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336765
    Gene description
    protein DMR6-LIKE OXYGENASE 1
    Locus tag
    OSNPB_040581100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336765 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (29845373..29847595, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (29338965..29341169, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase ATL45 Neighboring gene flavanone 3-dioxygenase 2-like Neighboring gene probably inactive receptor-like protein kinase At2g46850 Neighboring gene mitochondrial import inner membrane translocase subunit Tim13-like Neighboring gene B3 domain-containing protein Os04g0581400-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein DMR6-LIKE OXYGENASE 1
    Names
    Os04g0581100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      29845373..29847595 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778633.3 → XP_015634119.1  protein DMR6-LIKE OXYGENASE 1

      UniProtKB/TrEMBL
      A0A0P0WDV6, A3AWQ6, Q7XUN0
      Conserved Domains (1) summary
      PLN02912
      Location:4 → 346
      PLN02912; oxidoreductase, 2OG-Fe(II) oxygenase family protein

    RNA

    1. XR_010741112.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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