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    LOC9268219 BTB/POZ and MATH domain-containing protein 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9268219, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC9268219
    Gene description
    BTB/POZ and MATH domain-containing protein 1
    Locus tag
    OSNPB_040433000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (21890614..21893249, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (21491798..21492827, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At4g02750 Neighboring gene BTB/POZ and MATH domain-containing protein 2-like Neighboring gene uncharacterized LOC107280552 Neighboring gene uncharacterized LOC136355967

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: BTB/POZ and MATH domain-containing protein 1
    Names
    Bric-a-Brac, Tramtrack, Broad Complex BTB domain protein MrBTB1
    Os04g0433000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      21890614..21893249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066310094.1 → XP_066166191.1  LOW QUALITY PROTEIN: BTB/POZ and MATH domain-containing protein 1

      UniProtKB/TrEMBL
      B9FF95
    Nucleotide Protein
    Heading Accession and Version

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